usmle prep Forum Senior
Topics: 21 Posts: 100
| | 05/01/04 - 06:33 AM  
 
   
 
|   #1 |
can u describe it,i am not able to understand it??
|
| Sakaki- Forum Senior
Topics: 1 Posts: 238
| | 05/01/04 - 12:33 PM  
 
   
 
|   #2 |
A palindrome is just a set of duplex DNA that yields the same nucleotide sequence if one turns the helix by 180 degrees about the "centre" of that region. In other words, placing an axis in the middle of the sequence and rotating 180 degrees will yield superimposing images. G T T A A C ----- -- ------ C A A T T G Rotate at a point between the central A and T.
|
| mjl1717 Forum Hero

Topics: 955 Posts: 5,451
| | 05/01/04 - 01:32 PM  
 
   
 
|   #3 |
This may be a little out of context, but in laymans terms palindrome means spelling the same thing forwards or backwards--like the word radar. Hope this helps
___________________ Smell the coffee! "Is That an Osler move??"
|
| Alina T Forum Elite
Topics: 17 Posts: 388
| | 05/01/04 - 01:53 PM  
 
   
 
|   #4 |
very useful comment, mjl1717!......made me picture it easier. is there any clinical application of this concept? for me it's the first time i hear about it and i dont know more ....
___________________ There are 3 types of people: those who make things happen, those who watch things happen, and those who wonder what happened.
|
| Bela Forum Guru

Topics: 76 Posts: 412
| | 05/01/04 - 02:03 PM  
 
   
 
|   #5 |
mj, palindrome is not like sakaki describes it, correct? 'Cuz I was under the same impression as u explain...that the code is the same L :arrow: R or R :arrow: L
___________________ La vita e bella!
|
| Sakaki- Forum Senior
Topics: 1 Posts: 238
| | 05/01/04 - 11:09 PM  
 
   
 
|   #6 |
I've seen palindrome used in the context of a word that reads the same from left to right and vice versa (ex. MOM), but in molecular genetics, I'm pretty sure that what I stated earlier is what palindromes refer to. Edit: I checked in An Introduction to Genetic Analysis (Griffiths et al), and it states that "a DNA palindrome ... means that both strands have the same nucleotide sequence but in antiparallel orientation. Many different restriction enzymes recognize and cut specific palindromes." I'm quite sure that that would have more clinical application (at least in genetic analysis) than a word that reads the same in either direction. ^_^
|
| mjl1717 Forum Hero

Topics: 955 Posts: 5,451
| | 05/02/04 - 12:00 PM  
 
   
 
|   #7 |
Sakaki is correct . I just tried to facilitate other people in understanding what it actually means. [Because its one thing to have a definition of something, but something completely different (like Plato or Aristotle) explaining and consciously making sure someone else has complete grasp of a new concept]
___________________ Smell the coffee! "Is That an Osler move??"
|
| asmi Forum Hero
Topics: 1043 Posts: 4,609
| | 05/02/04 - 12:25 PM  
 
   
 
|   #8 |
Friends, Small peice of advice though not required :wink: ....just know what r palindromes and sticky ends and try to do examples for it, that is enough for exam .
|
| Sakaki- Forum Senior
Topics: 1 Posts: 238
| | 05/02/04 - 12:48 PM  
 
   
 
|   #9 |
Thanks for the heads-up, asmi. 
|
| step1 Forum Newbie
Topics: 5 Posts: 38
| | 05/03/04 - 06:59 PM  
 
   
 
|   #10 |
The sequences in the two strands of the recognition sites are "palindromes",having the same 5' to 3' sequence in both strands.Most restriction nucleases recognize sites consisting four to eight base pairs.Based on site of recognition,fragment will end up as a sticky end or blunt ends with no unpaired tails.
|
| kalsam Forum Elite
Topics: 31 Posts: 361
| | 05/08/04 - 03:34 PM  
 
   
 
|   #11 |
can anyone explain with an example please ..
___________________ "Read Repeat Recall Remember Recognise & Reproduce"
|
| rida Forum Guru
Topics: 109 Posts: 721
| | 05/09/04 - 04:16 PM  
 
   
 
|   #12 |
3' :arrow: :arrow: 5' direction CGACTGNNNNNCAGTCG 5' :arrow: :arrow: 3' Direction GCTGACNNNNNGTCAGC Palindrome = the sequence on one strand reading 5 to 3 is the same as the sequence on the complementary strand reading in the same direction. So if you read the top two in 5 to 3, they are the same. This helps in stabilization during transcription. Hope this helps!
___________________ "If He takes you to it, He'll take you through it."
|
| rubensssss Forum Guru
Topics: 95 Posts: 451
| | 05/10/04 - 06:02 PM  
 
   
 
|   #13 |
Thanks everyone, I have never heard about PALINDROME. Rita thanks, what you mean is one segment of DNA that are identical sequences of bases run in opposite directions. Ex 1 2 3 4 5 6 7 8 9 9 8 7 6 5 4 3 2 1 That's what you mean RITA?
___________________ Ruben sssss
|
| rida Forum Guru
Topics: 109 Posts: 721
| | 05/10/04 - 06:04 PM  
 
   
 
|   #14 |
Yes ruben, exactly!!!
___________________ "If He takes you to it, He'll take you through it."
|
| rubensssss Forum Guru
Topics: 95 Posts: 451
| | 05/10/04 - 06:04 PM  
 
   
 
|   #15 |
1 2 3 4 5 6 7 8 9 9 8 7 6 5 4 3 2 1 I can put it like it should.
___________________ Ruben sssss
|
| kalsam Forum Elite
Topics: 31 Posts: 361
| | 05/10/04 - 08:56 PM  
 
   
 
|   #16 |
Many many thanks ....to everyone!!!
___________________ "Read Repeat Recall Remember Recognise & Reproduce"
|
| usmle prep Forum Senior
Topics: 21 Posts: 100
| | 05/13/04 - 08:50 PM  
 
   
 
|   #17 |
Thanx a lot everyone! u made it very easy for me.
|
|
| |
| | | | | | | | | | | | | | | | | |